Bioinformatics News
How to get super-computing facilities for Bioinformatics analyses?
It is a big trouble to run molecular simulations and docking for large molecules without having any proper supercomputing facilities as they require more memory and time to finish.
Center for Development and Advanced Computing (CDAC) is located in India and famous for its supercomputing facilities. BRAF at CDAC is funded by the Department of Information Technology (MeitY), Ministry of Communications and Information Technology, Government of India. It provides computational applications to the Bioinformatics community on demand such as cloud computing. High-Performance Computing (HPC) Bioinformatics Resources & Applications Facility (BRAF) at C-DAC is the technology promoter which provides tools for analysis, data mining, and simulation of biological data.
Recently, High-Performance Computing (HPC) Bioinformatics Resources & Applications Facility (BRAF) at C-DAC has developed a dedicated server to provide a supercomputing facility to the researchers in the field of Bioinformatics. This server allows users to perform the following tasks using various software:
- Molecular modeling
- Molecular docking of large molecules
- Sequence analysis
- Genome alignment
- RNA analysis algorithm
- Repeats finding
- Gene finding
- Microarray data analysis
- ab-initio methods
All registered users can remotely log in to the server and submit their jobs. The remote access is provided to the national and international organizations as well as to the industries on request with terms & conditions applied.
For further information, visit the website CDAC-BRAF.
Bioinformatics News
VS_Analysis: A Python package to perform post-virtual screening analysis
Virtual screening (VS) is a crucial aspect of bioinformatics. As you may already know, there are various tools available for this purpose, including both paid and freely accessible options such as Autodock Vina. Conducting virtual screening with Autodock Vina requires less effort than analyzing its results. However, the analysis process can be challenging due to the large number of output files generated. To address this, we offer a comprehensive Python package designed to automate the analysis of virtual screening results.
Bioinformatics News
Proteins shape analyses reveal novel forms and connections.
A new study has revealed new forms of proteins that have never been seen before along with unexpected connections. Last year, Google DeepMind predicted the structure of all known proteins from organisms using AlphaFold [1].
Bioinformatics News
What is MANE project?
MANE is a collaborative project between NCBI and EMBL-EBI. It stands for Matched Annotation from NCBI and EMBL-EBI [1]. The datasets provided by NCBI and EMBL-EBI on the human genome are not identical across every gene.
Bioinformatics News
This Month in Bioinformatics- Research Updates of March 2022
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Bioinformatics News
BLAST+ 2.12.0- A more efficient version of BLAST is available
A new more efficient version of BLAST+ 2.12.o is available now [1]. This version provides more efficient multithreaded searches. (more…)
Bioinformatics News
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In this article, we summarize the latest interesting findings made this month of June in bioinformatics. (more…)
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Bioinformatics News
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Join Bioinformatics Review Research Group
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Bioinformatics News
This Month in Bioinformatics- Research Updates of November 2020
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This Month in Bioinformatics- Research Updates of October 2020
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