Flexible docking is when some residues in the interacting bodies (receptor and ligand) are kept flexible leaving the rest of the part rigid. In this article, we have demonstrated the site-specific docking with flexible side chains in the receptor using Autodock Vina [1].ContentsPreparation of receptor PDB fileDownloading ligandPreparation of PDBQT file of ligandPreparation of PDBQT … Continue reading How to perform Flexible Docking using Autodock Vina?