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query in topology prepartion

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shanitha A asked 2 years ago

I had prepared protein topology in Gromacs using Amber 99 Sb forcefield. The ligand topologies are prepared using antechamber, i got .gro file and .itp file . What are the modifications that can i do in topology file for further steps of MD simulation in Gromacs

1 Answers
Dr. Muniba FaizaDr. Muniba Faiza Staff answered 2 years ago