during the docking of Sn compound by Autodock vina, i am facing this error "AutoDock Vina throws an error with the following message: ATOM syntax incorrect: "Sn" is not a valid AutoDock type. Note that AutoDock atom types are case-sensitive"

Question

71 viewsNovember 23, 2024

0

User January 14, 2023 0 Comments

User Changed status to publish November 23, 2024

score 0 · Answer 1 · 2023-03-31T06:57:27+00:00

Hi,
Try adding these coordinates in the param file:
atom_par Pt 2.75 0.080 12.000 -0.00110 0.0 0.0 0 -1 -1 1 # Non H-bonding