Sequence Analysis

A collection of articles explaining operations of biological sequences for sequence analysis.

Aligning DNA reads against a local database using DIAMOND


DIAMOND is a program for high throughput pairwise alignment of DNA reads and protein sequences [1]. It is used for the high-performance analysis of large sequence data. In this article, we will make a local database of protein sequences and align protein sequences against the reference database. Keep Reading

Installing MEME suite on Ubuntu


MEME suite is used to discover novel motifs in unaligned nucleotide and protein sequences [1,2]. In this article, we will learn how to install MEME on Ubuntu. Keep Reading

Installing BLAT- A Pairwise Alignment Tool on Ubuntu


BLAT is a pairwise sequence alignment algorithm that is used in the assembly and annotation of the human genome [1]. In this article, we will install BLAT on Ubuntu. Keep Reading

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