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A perl script to convert multiline FASTA sequences into a single line

in Bioinformatics Programming by

There are different software or tools which require different kinds of input, especially, when you are trying to developing a pipeline or want to process multiple large files.

If you are dealing with a big FASTA file consisting of thousands of sequences split into a particular number of residues per line, and you want each sequence into a single line, then you can use this simple Perl program. Continue reading “A perl script to convert multiline FASTA sequences into a single line” »

How to extract fasta sequences from a multi-fasta file based on matching headers in a separate file?

in Bioinformatics Programming by

This is a simple Perl script to extract FASTA sequences from a large fasta file depending on the matching fasta headers present in another file. Continue reading “How to extract fasta sequences from a multi-fasta file based on matching headers in a separate file?” »

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