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Vina output analysis using Discovery Studio visualizer

in Docking/Drug Discovery/Softwares by

The discovery studio (DS) visualizer [1] offers several features for analyzing docking results. In previous articles (“Tutorial: Vina Output Analysis Using PyMol” and “Video Tutorial: Autodock Vina Result Analysis with PyMol“), the analysis of Autodock Vina [2] result using the Pymol viewer [3] was explained. In this article, the Autodock Vina result is being analyzed in the DS visualizer [1]. Continue reading “Vina output analysis using Discovery Studio visualizer” »

Autodock VinaXB for molecular docking of protein complexes containing halogen bonding interactions

in Docking/Softwares/Tools by

Molecular docking is the most widely used technique which is used to predict the binding affinities and bound conformations of a ligand and protein complex. Autodock Vina [1] is one of the most widely used docking software for structure-based drug designing.  Continue reading “Autodock VinaXB for molecular docking of protein complexes containing halogen bonding interactions” »

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