Electron density maps are available for most of the protein structures in PDB. Therefore, in this article, we are using PDB to generate electron density maps in Pymol.

Electron Density Map of whole protein

Follow these steps to generate an electron density map of the whole protein structure:

Electron Density Map of selected residue

Follow these steps to generate an electron density map of selected residue:


References

  1. The PyMOL Molecular Graphics System, Version 1.2r3pre, Schrödinger, LLC.