NGS

Next Generation Sequencing

Installing PANDAseq on Ubuntu

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PANDAseq is a bioinformatics tool that aligns paired-ends of Illumina sequences [1]. In this article, we are going to install PANDAseq on Ubuntu. Keep Reading

Installing Bismark on Ubuntu

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Bismark is a bioinformatics tool to map bisulfite treated sequencing reads to a genome [1]. It also determines cytosine methylation sites. In this article, we will install Bismark on Ubuntu. Keep Reading

FiNGS- A New Software providing Filters for Next Generation Sequencing

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We use somatic variant callers to detect mutations in cancer samples by comparing sequencing data tumor and normal sample pairs. This is followed by some ad-hoc filtering that may produce low precision data resulting in a large number of false positives. Keep Reading

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