Next Generation Sequencing

Installing PANDAseq on Ubuntu


PANDAseq is a bioinformatics tool that aligns paired-ends of Illumina sequences [1]. In this article, we are going to install PANDAseq on Ubuntu. Keep Reading

Installing Bismark on Ubuntu


Bismark is a bioinformatics tool to map bisulfite treated sequencing reads to a genome [1]. It also determines cytosine methylation sites. In this article, we will install Bismark on Ubuntu. Keep Reading

FiNGS- A New Software providing Filters for Next Generation Sequencing


We use somatic variant callers to detect mutations in cancer samples by comparing sequencing data tumor and normal sample pairs. This is followed by some ad-hoc filtering that may produce low precision data resulting in a large number of false positives. Keep Reading

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