How to install sdsorter on Ubuntu (Linux)?
Video Tutorial: How to use vs_analysis Python script for virtual screening result analysis of Autodock Vina?
Basic Methodology to Predict Antigen-Antibody Interactions in silico
What is Virtual Screening in Bioinformatics?
Blind Docking vs Site-specific Docking
Easy installation of GROMACS on Ubuntu 18.04 & 20.04
How to create an index file in GROMACS for MD simulation?
How to generate topology of small molecules & ligands for MD Simulation?
Tutorial: MD Simulation of small organic molecules using GROMACS
Tutorial: MD simulation with mixed solvents using GROMACS
RNAdetector- New Tool for RNA-Seq Data Analysis
Where to find Docking and MD simulation software?
IPD2.0- An Updated Version of IPD to Analyze the SARS-CoV-2 Genome
FEGS- A New Feature Extraction Model for Protein Sequence Analysis
Installing Anaconda3 on Ubuntu (Linux)
Installing RDPTools on Ubuntu (Linux)
NGlyAlign- A New Tool to Align Highly Variable Regions in HIV Sequences
How to install ClustalW2 on Ubuntu?
Installing HMMER package on Ubuntu
MOCCA- A New Suite to Model cis- regulatory Elements for Motif Occurrence Combinatorics
vs_Analysis.py: A Python Script to Analyze Virtual Screening Results of Autodock Vina
How to search motif pattern in FASTA sequences using Perl hash?
How to read fasta sequences from a file using PHP?
How to read fasta sequences as hash using perl?
sminalog_analysis.py – A new Python script to fetch top binding affinities from SMINA log file
Installing Pycharm on Ubuntu (Linux)
How to execute Unix/shell commands in PHP?
How to search for a specific character in a file using Python?
This Month in Bioinformatics- Research Updates of May 2021
This Month in Bioinformatics- Research Updates of April 2021
This Month in Bioinformatics- Research Updates of March 2021
This Month in Bioinformatics- Research Updates of February 2021
This Month in Bioinformatics- Research Updates of January 2021
Most widely used tools for drug-drug interaction prediction
How to download small molecules from ZINC database for virtual screening?
Prepare receptor and ligand files for docking using Python scripts
Virtual Screening Methodology for Structure-based Drug Designing
Beginner’s Guide for Docking using Autodock Vina
Installing TREE-PUZZLE on Ubuntu
Tutorial: Constructing phylogenetic tree using MEGA7
Update: A multi-epitope in silico vaccine candidate designed for Covid-19
Phylogenetics analysis of SARS-CoV-2 spike glycoproteins
Installing and executing ProtTest3 on Ubuntu
Homology Modeling vs ab initio Protein Structure Prediction
Tutorial: Basic protein structure modeling using MODELLER
Methodology for Homology Modeling of a Simple Protein
How to install DeepView-Swiss PDB Viewer on Linux?
Homology Modeling of α-Glucosidase Enzyme: 3D Structure Prediction
Basic bioinformatics concepts to learn for beginners
A Beginner’s Guide on How to Write Good Manuscripts
How to remove HETATMS and chains from PDB file?
Importance of Reasoning in Research
How to Find Binding Pocket/ Binding Site for Docking?
Tutorial: Vina Output Analysis Using PyMol
Video Tutorial: Autodock Vina Result Analysis with PyMol
Genome editing of human embryos using CRISPR/Cas9- crossing the ethics of gene editing?
How to perform docking in a specific binding site using AutoDock Vina?
BiR: Impact report – July 2016 & More
How to install Cortex on Ubuntu?
How to Compress and Decompress FASTQ, SAM/BAM & VCF Files using genozip?
Installing BCFtools on Ubuntu
Installing CRISPRCasFinder on Ubuntu
Genozip- a new compression tool for VCF files
In this article, some software/tools are mentioned that are most widely used for RNA secondary structure prediction.
Latest Comments