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Sequence Analysis - page 2

Alignment-free approaches for Sequence Analysis

in Algorithms/Sequence Analysis/Tools by

Multiple Sequence Alignment (MSA) is a fundamental aspect of Bioinformatics in order to identify the species, their functions, phylogeny, study the novel genes/ proteins, and so on. Multiple MSA tools are available with different specifications, which are based on the heuristic algorithm focusing on the speed rather than the accuracy. Continue reading “Alignment-free approaches for Sequence Analysis” »

EVOBLAST: Evolutionary Fingerprinting Analysis Module

in Sequence Analysis/Softwares by

In continuation with the series under “Do you Hyphy…”, this article envisages another very important analytical tool that Datamonkey web server[1] provides us called EVOBLAST[1,2]. EVOBALST stands for Evolutionary Fingerprinting Analysis Results[3]. Continue reading “EVOBLAST: Evolutionary Fingerprinting Analysis Module” »

Predictive metagenomics profiling: why, what and how ?

in Meta Analysis/NGS/Sequence Analysis/Tools by

What is predictive metagenomics profiling?

Recently, predictive metagenomics profiling (PMP) has been added to the microbial ecologist’s arsenal of strategies for probing microbial communities. Continue reading “Predictive metagenomics profiling: why, what and how ?” »

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