I have predicted a protein structure using SwissModel but I don’t know its binding sites. The structure is not available in PDB. How can I predict binding sites for virtual screening?
Thanks in advance!
User Changed status to publish November 23, 2024
Hi,
You can predict binding sites using the CASTp server and any other prediction server. You can use this predicted site to define a grid box for docking/virtual screening.
User Changed status to publish November 23, 2024