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site specific docking

Browse QuestionsCategory: Questionssite specific docking
dekpitsusanti asked 2 years ago

Can we use site-specific docking on PDB id without ligand bind on it, which we know the active or binding site from other literatur or their homolog?

1 Answers
Dr. Muniba Faiza Staff answered 2 years ago

Yes, you can, if it’s binding site is unknown, you can predict. But generally, the binding sites of protein structures available in PDB can be easily found in the literature.