Tag: protein structure prediction

How to predict binding pocket/site using CASTp server?

The CASTp server allows you to predict the binding sites in a…

Dr. Muniba Faiza Dr. Muniba Faiza

Protein structure & folding information exploited from remote homologs.

Remote homologs are similar protein structures that share similar functions, but there…

Dr. Muniba Faiza Dr. Muniba Faiza

AlphaFill- New algorithm to fill ligands in AlphaFold models.

AlphaFold is a popular artificial intelligence based protein prediction tool . Though…

Dr. Muniba Faiza Dr. Muniba Faiza

SWISS-MODEL: Uses & Applications

SWISS-MODEL is a bioinformatics tool that is widely used for protein structure…

Dr. Muniba Faiza Dr. Muniba Faiza

Modeller- Uses & Applications

Modeller is a standalone tool for homology modeling or comparative modeling of…

Tariq Abdullah Tariq Abdullah

Homology Modeling vs ab initio Protein Structure Prediction

In one of our previous articles, we explained the basic methodology involved…

Tariq Abdullah Tariq Abdullah

Tutorial: Basic protein structure modeling using MODELLER

SALI MODELLER is one of the most widely used command-line bioinformatics software…

Dr. Muniba Faiza Dr. Muniba Faiza

Methodology for Homology Modeling of a Simple Protein

Previously, we have explained the initial methods involved in the structure prediction…

Dr. Muniba Faiza Dr. Muniba Faiza