Bioinformatics ReviewBioinformatics Review
Notification Show More
Font ResizerAa
  •  Home
  • Docking
  • MD Simulation
  • Tools
  • More Topics
    • Softwares
    • Sequence Analysis
    • Algorithms
    • Bioinformatics Programming
    • Bioinformatics Research Updates
    • Drug Discovery
    • Phylogenetics
    • Structural Bioinformatics
    • Editorials
    • Tips & Tricks
    • Bioinformatics News
    • Featured
    • Genomics
    • Bioinformatics Infographics
  • Community
    • BiR-Research Group
    • Community Q&A
    • Ask a question
    • Join Telegram Channel
    • Join Facebook Group
    • Join Reddit Group
    • Subscription Options
    • Become a Patron
    • Write for us
  • About Us
    • About BiR
    • BiR Scope
    • The Team
    • Guidelines for Research Collaboration
    • Feedback
    • Contact Us
    • Recent @ BiR
  • Subscription
  • Account
    • Visit Dashboard
    • Login
Font ResizerAa
Bioinformatics ReviewBioinformatics Review
Search
Have an existing account? Sign In
Follow US
Pedigree AnalysisSoftwareTools

ped_drew: A New Tool for Pedigree Visualization

Tariq Abdullah
Last updated: December 30, 2020 8:57 pm
Tariq Abdullah
Share
1 Min Read
peddrew: pedigree analysis tool
SHARE

A new command-line and web tool are developed for easy visualization of pedigree files. These files help to understand the complete family tree in case of any disease or to know the affected status of individuals across multiple generations.

This bioinformatics tool is known as “ped_drew” [1]. ped_drew allows the easy visualization of complex pedigrees that involve multiple generations. The web tool is available at https://peddraw.github.io. On the web tool, users can either upload a pedigree file or paste the file in the provided input box. It allows downloading the output in PNG, SVG, and PDF format.

The command-line tool of ped_drew uses Graphviz to generate image files. It requires one-liner commands [1]. It is available to download at https://github.com/mvelinder/ped_draw. ped_drew is written in Python and requires Python2.7.15 or greater version. Graphviz must also be installed on your system as it is not provided with the software.

For further details, click here.


References

  1. Velinder, M., Lee, D., & Marth, G. (2020). ped_draw: pedigree drawing with ease. BMC bioinformatics, 21(1), 1-5.

 

TAGGED:bioinformatics toolpedigree analysis
Share This Article
Facebook Copy Link Print
ByTariq Abdullah
Tariq is founder of Bioinformatics Review and Lead Developer at IQL Technologies. His areas of expertise include algorithm design, phylogenetics, MicroArray, Plant Systematics, and genome data analysis. If you have questions, reach out to him via his homepage.
Leave a Comment

Leave a Reply Cancel reply

You must be logged in to post a comment.

Starting in Bioinformatics? Do This First!
Starting in Bioinformatics? Do This First!
Tips & Tricks
[Editorial] Is it ethical to change the order of authors’ names in a manuscript?
Editorial Opinion
Installing bbtools on Ubuntu
[Tutorial] Installing BBTools on Ubuntu (Linux).
Sequence Analysis Software Tools
wes_data_analysis Whole Exome Sequencing (WES) Data visualization Toolkit
wes_data_analysis: Whole Exome Sequencing (WES) Data visualization Toolkit
Bioinformatics Programming GitHub Python

You Might Also Like

Build molecules in Pymol
Tools

How to build molecules in Pymol?

January 8, 2021
How to install IQ-TREE on Ubuntu (Linux)?
SoftwareTools

How to install IQ-TREE on Ubuntu (Linux)?

December 5, 2021
AlgorithmsDatabasesSequence AnalysisSoftwareTools

Simulated sequence alignment software: An alternative to MSA benchmarks

May 20, 2020
pairwise alignment using DIAMOND
Sequence AnalysisSoftwareTools

Aligning DNA reads against a local database using DIAMOND

September 28, 2020
Copyright 2024 IQL Technologies
  • Journal
  • Customer Support
  • Contact Us
  • FAQs
  • Terms of Use
  • Privacy Policy
  • Cookie Policy
  • Sitemap
Welcome Back!

Sign in to your account

Username or Email Address
Password

Lost your password?

Not a member? Sign Up