Bioinformatics ReviewBioinformatics Review
Notification Show More
Font ResizerAa
  •  Home
  • Docking
  • MD Simulation
  • Tools
  • More Topics
    • Softwares
    • Sequence Analysis
    • Algorithms
    • Bioinformatics Programming
    • Bioinformatics Research Updates
    • Drug Discovery
    • Phylogenetics
    • Structural Bioinformatics
    • Editorials
    • Tips & Tricks
    • Bioinformatics News
    • Featured
    • Genomics
    • Bioinformatics Infographics
  • Community
    • BiR-Research Group
    • Community Q&A
    • Ask a question
    • Join Telegram Channel
    • Join Facebook Group
    • Join Reddit Group
    • Subscription Options
    • Become a Patron
    • Write for us
  • About Us
    • About BiR
    • BiR Scope
    • The Team
    • Guidelines for Research Collaboration
    • Feedback
    • Contact Us
    • Recent @ BiR
  • Subscription
  • Account
    • Visit Dashboard
    • Login
Font ResizerAa
Bioinformatics ReviewBioinformatics Review
Search
Have an existing account? Sign In
Follow US
Protein VisualizationToolsWebserver

Evaluate predicted protein distances using DISTEVAL

Dr. Muniba Faiza
Last updated: January 19, 2021 2:33 pm
Dr. Muniba Faiza
Share
1 Min Read
Evaluate predicted protein distances using DISTEVAL
SHARE

A new webserver called DISTEVAL [1] is developed that evaluates the predicted protein distances. This web server evaluates the inter-residue distances and offers several other features as well.

DISTEVAL assesses the predicted inter-residue contacts and distances both quantitatively and qualitatively [1]. It can evaluate the protein distances even without the 3D structure of a protein. DISTEVAL evaluates the predictions using different matrices including root mean squared error, mean absolute error, and contact precision.

Users input predicted contacts or distances and the 3D structure of the protein. DISTEVAL evaluates the input and generates heatmaps and chord diagrams as qualitative assessment. The heatmaps and chord diagrams can be drawn in three different coloring schemes [1].

DISTEVAL web server is freely accessible at http://deep.cs.umsl.edu/disteval/. It is also available to download from Github. The source code is written in Python, HTML, & CSS.

For more details on DISTEVAL, click here.


References

  1. Adhikari, B., Shrestha, B., Bernardini, M. et al. (2021). DISTEVAL: a web server for evaluating predicted protein distances. BMC Bioinformatics 22, 8.
TAGGED:distevalprotein contactsprotein distanceswebserver
Share This Article
Facebook Copy Link Print
ByDr. Muniba Faiza
Follow:
Dr. Muniba is a Bioinformatician based in New Delhi, India. She has completed her PhD in Bioinformatics from South China University of Technology, Guangzhou, China. She has cutting edge knowledge of bioinformatics tools, algorithms, and drug designing. When she is not reading she is found enjoying with the family. Know more about Muniba
Leave a Comment

Leave a Reply Cancel reply

You must be logged in to post a comment.

Starting in Bioinformatics? Do This First!
Starting in Bioinformatics? Do This First!
Tips & Tricks
[Editorial] Is it ethical to change the order of authors’ names in a manuscript?
Editorial Opinion
Installing bbtools on Ubuntu
[Tutorial] Installing BBTools on Ubuntu (Linux).
Sequence Analysis Software Tools
wes_data_analysis Whole Exome Sequencing (WES) Data visualization Toolkit
wes_data_analysis: Whole Exome Sequencing (WES) Data visualization Toolkit
Bioinformatics Programming GitHub Python

You Might Also Like

[Tutorial] Installing Autodock-Vina-develop package on Ubuntu.
SoftwareTools

[Tutorial] Installing Autodock-Vina-develop package on Ubuntu.

September 29, 2023
SoftwareTools

Installation of LigPlot+ on Ubuntu

May 20, 2020
RNAdetector- New Tool for RNA-Seq Data Analysis
RNA-seq analysisSoftwareTools

RNAdetector- New Tool for RNA-Seq Data Analysis

June 30, 2021
How to download FASTA sequences from PDB for multiple structures?
Tips & TricksTools

How to download FASTA sequences from PDB for multiple structures?

July 14, 2022
Copyright 2024 IQL Technologies
  • Journal
  • Customer Support
  • Contact Us
  • FAQs
  • Terms of Use
  • Privacy Policy
  • Cookie Policy
  • Sitemap
Welcome Back!

Sign in to your account

Username or Email Address
Password

Lost your password?

Not a member? Sign Up