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Bioinformatics ProgrammingGitHubPython

How to make swarm boxplot?

Dr. Muniba Faiza
Last updated: February 23, 2023 11:28 pm
Dr. Muniba Faiza
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How to make swarm boxplot?
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With the new year, we are going to start with a very simple yet complicated topic (for beginners) in bioinformatics. In this tutorial, we provide a simple code to plot swarm boxplot using matplotlib and seaborn.

Here, we provide a simple Python script to plot the docking score of a few protein complexes. The complex names, docking scores, and ligand types are provided in a CSV sheet. We are plotting the docking score of ligands on a box plot showing types of ligands in different colors.

Availability

The script is available on GitHub under the package ‘cheminformatics‘.


 

TAGGED:boxplotmatplotlibseabornswarmplot
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ByDr. Muniba Faiza
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Dr. Muniba is a Bioinformatician based in New Delhi, India. She has completed her PhD in Bioinformatics from South China University of Technology, Guangzhou, China. She has cutting edge knowledge of bioinformatics tools, algorithms, and drug designing. When she is not reading she is found enjoying with the family. Know more about Muniba
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