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Bioinformatics Programming

How to commit changes to GitHub repository using vs code?

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How to commit changes to GitHub repository using vs code?

In this article, we are providing a few commands that are used to commit changes to GitHub repositories using VS code terminal.

Committing changes for the first time

For committing changes for the first time, follow these steps:

  • Open VS code –> go to Terminal.
  • Clone your GitHub repository.
    Go to your desired directory where you want to clone the repository and paste the following command:
    $ git clone <url-to-repository>
  • Now make all changes you want.
  • After that, run the following command:
    $ git add .
    Here, the dot (.) refers to all folders.
  • Now, commit changes with a message:
    $ git commit -m "write something here"
  • Push all changes to the repository.
    $ git push
  • Now, refresh your GitHub repository, you will be able to see all changes there.

Committing further changes

If you have already committed any changes before, then you don’t need to clone your repository again. Make changes and then commit and push as shown above.


 

Tariq is founder of Bioinformatics Review and CEO at IQL Technologies. His areas of expertise include algorithm design, phylogenetics, MicroArray, Plant Systematics, and genome data analysis. If you have questions, reach out to him via his homepage.

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Bioinformatics Programming

vs_analysis_compound.py: Python script to search for binding affinities based on compound names.

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vs_analysis_compound.py: Python script to search for binding affinities based on compound names.

Previously, we have provided the vs_analysis.py script to analyze virtual screening (VS) results obtained from Autodock Vina. In this article, we have provided another script to search for binding affinity associated with a compound. (more…)

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Bioinformatics Programming

How to download files from an FTP server using Python?

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How to download files from an FTP server using Python?

In this article, we provide a simple Python script to download files from an FTP server using Python. (more…)

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Bioinformatics Programming

How to convert the PDB file to PSF format?

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How to convert the PDB file to PSF format?

VMD allows converting PDB to PSF format but sometimes it gives multiple errors. Therefore, in this article, we are going to convert PDB into PSF format using a different method. (more…)

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