DockingAnalyzer.py: A New Python script to Identify Ligand Binding in Protein Pockets.
High-throughput virtual screening (HTVS) is a pivotal technique in drug discovery that…
VS_Analysis: A Python package to perform post-virtual screening analysis
Virtual screening (VS) is a crucial aspect of bioinformatics. As you may…
vs_interaction_analysis.py: Python script to perform post-virtual screening analysis
Analyzing the results of virtual screening (VS) performed with Autodock Vina can…
vs_analysis_compound.py: Python script to search for binding affinities based on compound names.
Previously, we have provided the vs_analysis.py script to analyze virtual screening (VS)…
How to sort binding affinities based on a cutoff using vs_analysis.py script?
Previously, we have provided a Python script (vs_analysis.py) to analyze the virtual…
Virtual Screening using Autodock Vina: Frequently Asked Questions & Answers for Starters
Virtual Screening (VS) is one of the important techniques in bioinformatics. It…
How to perform virtual screening using Pyrx?
Pyrx is a bioinformatics tool to perform virtual screening . We previously…
sminalog_analysis.py – A new Python script to fetch top binding affinities from SMINA log file
In one of our previous posts, we provided a Python script for…
How to install sdsorter on Ubuntu (Linux)?
sdsorter is a tool that helps in the easy manipulation of SDF…
Video Tutorial: How to use vs_analysis Python script for virtual screening result analysis of Autodock Vina?
This is a demonstration video of our previously mentioned Python script (vs_analysis.py)…
What is Virtual Screening in Bioinformatics?
If you are a beginner in the field of bioinformatics, you must…
Virtual Screening: Frequently Asked Questions & Answers for Starters
Virtual screening can be difficult for beginners. Here are some FAQs for…
EasyVS: A new webserver for easy virtual screening
EasyVS is a web-based bioinformatics tool that simplifies the selection of the…
Converting smiles into 3D structures using openbabel.
Openbabel is used to inter-convert many file formats . It is available…
How to download small molecules from ZINC database for virtual screening?
It is difficult to manage thousands of compounds altogether while performing virtual…
Virtual Screening Methodology for Structure-based Drug Designing
Virtual High Throughput Screening (vHTS), also known as Virtual Screening (VS) is…
Video Tutorial: Virtual Screening using Autodock Vina
This is a video tutorial of our existing article.
How to perform virtual screening using Autodock Vina?
Virtual screening is used to identify small molecules that are most likely…