Software Structural Bioinformatics Tools Video Tutorial

Video Tutorial: Calculating binding pocket volume using PyVol plugin.

Last updated: November 23, 2024 11:13 pm

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This is a video tutorial for calculating binding pocket volume using the PyVol plugin [1] in Pymol [2].

If you haven’t installed the PyVol plugin yet, read this tutorial. Click here for the written tutorial for binding pocket volume calculation using the PyVol plugin.

References

Smith, RH, Dar, AC, & Schlessinger, A. (2019). PyVOL: a PyMOL plugin for visualization, comparison, and volume calculation of drug-binding sites. BioRxiv , 816702.
The PyMOL Molecular Graphics System, Version 1.2r3pre, Schrödinger, LLC.

TAGGED:binding pocket volume Pymol PyVOL

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ByDr. Muniba Faiza

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Dr. Muniba is a Bioinformatician based in New Delhi, India. She has completed her PhD in Bioinformatics from South China University of Technology, Guangzhou, China. She has cutting edge knowledge of bioinformatics tools, algorithms, and drug designing. When she is not reading she is found enjoying with the family. Know more about Muniba