Bioinformatics Software, Concepts, Articles, Career, & More — Bioinformatics Review

Tools

Installing bbtools on Ubuntu

[Tutorial] Installing BBTools on Ubuntu (Linux).

installing exabayes on Ubuntu

[Tutorial] Installing Exabayes on Ubuntu (Linux).

How to see ligand interactions and label residues in DS Visualizer?

How to see ligand interactions and label residues in DS Visualizer?

Installing OpenBabel on Ubuntu

[Tutorial] How to install openbabel on Ubuntu (Linux)?

How to Fix Broken Vina Docked Output in DS Visualizer: A Step-by-Step Guide

How to Fix Broken Vina Docked Output in DS Visualizer: A Step-by-Step Guide

how to install Discovery Studio Visualizer on Ubuntu (Linux)?

How to install & execute Discovery Studio Visualizer on Ubuntu (Linux)?

[Tutorial] Installing HTSlib on Ubuntu (Linux).

[Tutorial] Installing HTSlib on Ubuntu (Linux).

AI vs Physics in Molecular Docking

AI vs Physics in Molecular Docking: Towards Faster and More Accurate Pose Prediction

Abstract Molecular docking is a computational technique used in drug discovery to predict how small molecules (ligands) fit into the three-dimensional binding site of a target protein. By modeling these…

October 31, 2025

Algorithm

MOCCA- A New Suite to Model cis- regulatory Elements for Motif Occurrence Combinatorics

MOCCA- A New Suite to Model cis- regulatory Elements for Motif Occurrence Combinatorics

VS-Analysis: A Python Script to Analyze Virtual Screening Results of Autodock Vina

vs_Analysis.py: A Python Script to Analyze Virtual Screening Results of Autodock Vina

How to search motif pattern in FASTA sequences using Perl hash?

How to read fasta sequences from a file using PHP?

How to read fasta sequences as hash using perl?

BETSY: A new backward-chaining expert system for automated development of pipelines in Bioinformatics

Algorithm and workflow of miRDB

Video Tutorials

Video Tutorial: Fix broken Vina output in DS Visualizer

Video Tutorial: Fix broken Vina output in DS Visualizer.

Dr. Muniba Faiza

March 13, 2025

Calculate Binding Pocket Volume in Pymol (using PyVol plugin).

Video Tutorial: Calculating binding pocket volume using PyVol plugin.

Dr. Muniba Faiza

November 23, 2024

Video Tutorial: Self-Organizing Maps in MATLAB

Video Tutorial: Self-Organizing Maps in MATLAB

Dr. Muniba Faiza

November 23, 2024

How to use vs_analysis python script for virtual screening result analysis of Autodock Vina

Video Tutorial: How to use vs_analysis Python script for virtual screening result analysis of Autodock Vina?

Dr. Muniba Faiza

November 23, 2024

Latest Community Questions and Answers

vs_analysis-py-showed-syntax-error-invalid-syntax

how-to-download-small-molecules-from-zinc-database-for-virtual-screening ?

how-to-download-small-molecules-from-zinc-database-for-virtual-screening

install-mgl-tools-ubuntu

Bioinformatics Review

APPRECATE - ACKNOWLEDGE - INSPIRE

AWARDS 2024

10 years of Bioinformatics Review: From a Blog to a Bioinformatics Knowledge Hub!

Dr. Muniba Faiza

October 2, 2025

Starting in Bioinformatics? Do This First!

Starting in Bioinformatics? Do This First!

Dr. Muniba Faiza

August 11, 2025

Editorial Opinion

[Editorial] Is it ethical to change the order of authors’ names in a manuscript?

Dr. Muniba Faiza

June 3, 2025