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Protein Visualization

Video Tutorial: Pymol Basic Functions- Part II

Dr. Muniba Faiza

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Pymol basic functions- part II

This video tutorial is in continuation of our previous tutorial.


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Video Tutorial: Basic PyMol Functions

Dr. Muniba is a Bioinformatician based in New Delhi, India. She has completed her PhD in Bioinformatics from South China University of Technology, Guangzhou, China. She has cutting edge knowledge of bioinformatics tools, algorithms, and drug designing. When she is not reading she is found enjoying with the family. Know more about Muniba

Protein Visualization

Evaluate predicted protein distances using DISTEVAL

Dr. Muniba Faiza

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Evaluate predicted protein distances using DISTEVAL

A new webserver called DISTEVAL [1] is developed that evaluates the predicted protein distances. This web server evaluates the inter-residue distances and offers several other features as well. (more…)

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Protein Visualization

How to find disulfides in protein structure using Pymol?

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find disulfides in protein structure using pymol

As shown in previous articles, Pymol [1] has several functions. In this article, we will show how to look for disulfide in protein crystal structures using Pymol. (more…)

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Protein Visualization

Video Tutorial: Basic Functions of PyMol

Dr. Muniba Faiza

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on

video tutorial: Pymol basics

Previously, we have shown how to analyze Vina output of docking in PyMol [1]. (more…)

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Protein Visualization

Plugin to visualize CASTp results in PyMOL

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CASTpyMOL plugin for pymol

CASTp (Computed Atlas of Surface Topography of proteins) server is used to predict binding pockets and cavities in proteins [1]. It displays binding pockets precisely and predicts all possible binding pockets or cavities based on an algorithm. (more…)

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