Beginner’s Guide for Docking using Autodock Vina

We have compiled all articles on docking into a Special Issue. This is a complete guide on molecular docking using Autodock Vina for beginners. It includes blind docking, site-specific docking, installation, output analysis, and so on.

This issue includes the following articles:

• How to install AutoDock Vina on Ubuntu?
• Video tutorial: How to install Autodock Vina on Ubuntu?
• How to perform docking in a specific binding site using AutoDock Vina?
• Video Tutorial: How to perform docking using Autodock Vina
• How to perform blind docking using AutoDock Vina?
• Tutorial: Vina Output Analysis Using PyMol
• Video Tutorial: Autodock Vina Result Analysis with PyMol
• Vina output analysis using Discovery Studio visualizer
• Autodock VinaXB for molecular docking of protein complexes containing halogen bonding interactions
• How to install Raccoon plugin on Ubuntu for virtual screening using Autodock?
• Raccoon2: A GUI facilitating virtual screenings with Autodock and Autodock Vina
• How to perform virtual screening using Autodock Vina?
• Site-specific docking: Frequently Asked Questions & answers for starters
• MGL Tools & Autodock Vina installation: Frequently Asked Questions and Answers

You can also find this special issue on Bioinformatics Review E-Prints.