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A short introduction to protein structures modification and ModFinder

in Sequence Analysis/Softwares/Tools by

A lot of protein structures are determined on a large scale and submitted in Protein Data Bank (PDB) www.rcsb.org [1]. After the experimental determination of these structures, they are used in many scientific studies and experiments are performed upon them such as mutagenesis, docking, and so on. Continue reading “A short introduction to protein structures modification and ModFinder” »

Methods to detect the effects of alternative splicing and transcription on proteins

in Genomics/Softwares/Tools by

Alternative splicing and the transcription are the most familiar processes amongst the biological processes. Alternative splicing is a process by which various forms of mRNA are generated from the same gene. A gene is consists of various exons and introns and the exons are joined together in different ways [1]. Continue reading “Methods to detect the effects of alternative splicing and transcription on proteins” »

PcircRNA_finder: Tool to predict circular RNA in plants

in Data Mining/Softwares/Tools by

The non-coding circular RNAs (circRNA) play important role in controlling cellular processes. circRNAs are covalently bonded continuous closed loops which originate from the exonic region, known as exonic circRNA, but they can also arise from the intronic and the intergenic regions. Continue reading “PcircRNA_finder: Tool to predict circular RNA in plants” »

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