Installing FragGeneScan on Ubuntu
FragGeneScan is a bioinformatics software to find fragmented genes in short reads…
Installing MEME suite on Ubuntu
MEME suite is used to discover novel motifs in unaligned nucleotide and…
Installing BLAT- A Pairwise Alignment Tool on Ubuntu
BLAT is a pairwise sequence alignment algorithm that is used in the…
Video Tutorial: MD Simulation using GROMACS
This is a video tutorial of our existing article "Molecular Dynamics (MD)…
Some common awk bash commands to modify multi-FASTA files
Some basic operations on multi-FASTA sequence files is a tedious task without…
Installing CRISPRCasFinder on Ubuntu
CRISPR/Cas9 is a genome editing technology trending fastly. It is used to…
Prepare receptor and ligand files for docking using Python scripts
Docking software such as Autodock4 and Autodock Vina require input receptor and…
Installing CHARMM on Ubuntu
CHARMM (Chemistry at Harvard Molecular Mechanics) is a molecular simulation program that…
How to use Clustal Omega and MUSCLE command-line tools for multiple sequence alignment?
Clustal Omega and MUSCLE are bioinformatics tools that are used for multiple…
Multiple Sequence Alignment and Phylogenetic Tree construction using ClustalW2 command-line tool
ClustalW2 is a bioinformatics tool for multiple sequence alignment of DNA or…
Video Tutorial: Virtual Screening using Autodock Vina
This is a video tutorial of our existing article.
How to perform graph-based clustering of peptide/protein sequences using MCL?
Markov Cluster Algorithm (MCL) is a clustering algorithm that clusters networks .…
Video tutorial: Installing GROMACS on Ubuntu
This is a video tutorial of our existing article on GROMACS (Abraham,…
How to perform docking in a specific binding site using AutoDock Vina?
AutoDock Vina is a bioinformatics tool that is used to perform in-silico…