Tag: ubuntu

[Tutorial] Installing Rosetta 3.21 on Ubuntu

Rosetta is a bioinformatics software for modeling and protein structure analysis .…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing PatchDock on Ubuntu (Linux)

PatchDock is a docking algorithm that is based on the shape complementarity…

Tariq Abdullah Tariq Abdullah

Easy installation of some alignment software on Ubuntu (Linux) 18.04 & 20.04

There are commonly used alignment programs such as muscle, blast, clustalx, and…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing CDK (Chemistry Development Kit) on Ubuntu (Linux)

CDK stands for chemistry development kit . This is an open source…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing Anaconda3 on Ubuntu (Linux)

Anaconda is an open-source toolkit that is useful in programming and machine…

Tariq Abdullah Tariq Abdullah

Installing Pycharm on Ubuntu (Linux)

Pycharm is an integrated development environment (IDE) for developers. It combines Python…

Tariq Abdullah Tariq Abdullah

Installing RDPTools on Ubuntu (Linux)

RDP provides analysis tools called RDPTools. These tools are used to high-throughput…

Dr. Muniba Faiza Dr. Muniba Faiza

Tutorial: Basic Bioinformatics Software Installation on Ubuntu (Linux)

In this article, we are going to install some basic bioinformatics tools…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing SAMtools on Ubuntu

SAMtools is a software package for high-throughput sequencing data analysis . It…

Tariq Abdullah Tariq Abdullah

Installing PANDAseq on Ubuntu

PANDAseq is a bioinformatics tool that aligns paired-ends of Illumina sequences .…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing TopHat2 on Ubuntu

TopHat is one of the most widely used tools for RNA-seq reads…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing Bismark on Ubuntu

Bismark is a bioinformatics tool to map bisulfite treated sequencing reads to…

Dr. Muniba Faiza Dr. Muniba Faiza

How to install ClustalW2 on Ubuntu?

Clustal packages are quite useful in multiple sequence alignments. Especially, when you…

Tariq Abdullah Tariq Abdullah

How to install Cortex on Ubuntu?

Cortex is a user-friendly framework for genome analysis . It acquires less…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing TREE-PUZZLE on Ubuntu

TREE-PUZZLE is a software to reconstruct phylogenetic trees using the maximum likelihood…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing HMMER package on Ubuntu

HMMER tool is used for searching sequence homologs using profile hidden Markov…

Tariq Abdullah Tariq Abdullah

Installing Cytoscape on Ubuntu

Cytoscape is a software for the easy visualization of complex networks .…

Tariq Abdullah Tariq Abdullah

Method-1: Installing GROMACS on Ubuntu with CUDA GPU Support

GROMACS is one of the most popular software in bioinformatics for molecular…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing GROMOS96 on Ubuntu

GROMOS96 is a well-known software package used for biomolecular simulations . It…

Dr. Muniba Faiza Dr. Muniba Faiza

Installing MGLTools2 package (ADFR/AGFR/AutoSite) on Ubuntu

MGLTools2 package comes with three different tools for docking: ADFR, AGFR, and…

Dr. Muniba Faiza Dr. Muniba Faiza