NGlyAlign- A New Tool to Align Highly Variable Regions in HIV Sequences
It is necessary to detect highly variable regions in envelopes of viruses…
How to remove HETATMS and chains from PDB file?
This is a basic tutorial on removing the hetero-atoms (HETATMS) and chains…
How to install ClustalW2 on Ubuntu?
Clustal packages are quite useful in multiple sequence alignments. Especially, when you…
How to find disulfides in protein structure using Pymol?
As shown in previous articles, Pymol has several functions. In this article,…
How to build molecules in Pymol?
Pymol has many functions that you keep finding on exploration. In this…
ped_drew: A New Tool for Pedigree Visualization
A new command-line and web tool are developed for easy visualization of…
Most widely used software for docking results image generation
Computational docking is an important technique in bioinformatics. The docking result interpretation…
Installing HMMER package on Ubuntu
HMMER tool is used for searching sequence homologs using profile hidden Markov…
Installing Cytoscape on Ubuntu
Cytoscape is a software for the easy visualization of complex networks .…
GIANT: A New Tool for Transcriptomic Data Analysis
Transcriptomic data analysis is an important requirement in biomedical research. The bioinformatics…
Installing FASTX-toolkit on Ubuntu
FASTX-toolkit is a command-line bioinformatics software package for the preprocessing of short…
Installing SIFT for Missense Variants on Ubuntu
SIFT is a bioinformatics tool for predicting missense effects of non-synonymous/missense variations…
smORFunction: A Tool for ORFs and Microproteins Function Prediction
small open reading frames (smORFs) that are less than 100 codons in…
Identifying binding sites in receptors using AutoSite tool
AutoSite is a computational method and tool that is used for the…
SequelTools: A new suite for PacBio Sequel raw sequence data analysis
A new suite of tools called SequelTools has been developed for analyzing…
MAIRA: New Program for Metagenomic Sequencing Data Analysis
MAIRA is a new software for taxonomic and functional analysis of long…
Installing GalaxyPepDock & Galaxy-Server on Ubuntu
GalaxyPepDock is a software used for protein-peptide docking based on interaction similarity.…
Most widely used tools for RNA Secondary Structure Prediction
In this article, some software/tools are mentioned that are most widely used…