Dr. Muniba Faiza

Dr. Muniba is a Bioinformatician based in New Delhi, India. She has completed her PhD in Bioinformatics from South China University of Technology, Guangzhou, China. She has cutting edge knowledge of bioinformatics tools, algorithms, and drug designing. When she is not reading she is found enjoying with the family. Know more about Muniba
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260 Articles

How to install VMD on Ubuntu?

In this article, we are going to install VMD on Ubuntu.

Dr. Muniba Faiza

How to install GROMACS on Apple M1 (MacOS)?

We have provided a few articles on GROMACS installation on Ubuntu. In…

Dr. Muniba Faiza

PyMol: Uses & Applications

PyMol is one of the most widely used bioinformatics software. Generally, it…

Dr. Muniba Faiza

[Tutorial] How to install Autodock Vina on Mac OS?

We have provided several articles on Vina installation on Ubuntu including video…

Dr. Muniba Faiza

Virtual Screening using Autodock Vina: Frequently Asked Questions & Answers for Starters

Virtual Screening (VS) is one of the important techniques in bioinformatics. It…

Dr. Muniba Faiza

SWISS-MODEL: Uses & Applications

SWISS-MODEL is a bioinformatics tool that is widely used for protein structure…

Dr. Muniba Faiza

How to find a best fit model using IQ-TREE?

Previously, we have provided an installation tutorial for IQ-TREE on Ubuntu. In…

Dr. Muniba Faiza

How to save good quality images in Pymol GUI?

Pymol is a Python-based molecular viewer that is used for multiple purposes.…

Dr. Muniba Faiza

How to install IQ-TREE on Ubuntu (Linux)?

IQ-TREE is a bioinformatics software for phylogenetic/phylogenomic inference. It is available as…

Dr. Muniba Faiza

Performing in silico mutagenesis using Pymol?

Pymol is a molecular viewer that is mostly used for visualization purposes.…

Dr. Muniba Faiza

Installing Conda on Ubuntu (Linux)

Conda (Anaconda, Inc.) is an open-source dependency, package, and environment management system…

Dr. Muniba Faiza

How to compare two pairwise alignments using Modeller-10.1?

Modeller-10.1 is the latest version of the software. We can perform multiple…

Dr. Muniba Faiza

Installing MODELLER 10.1 on Linux/Ubuntu

MODELLER is a software package that is generally used to predict protein…

Dr. Muniba Faiza

[Tutorial] How to perform docking of zinc metalloproteins using Autodock Vina?

Proteins containing zinc atoms are docked in a different way than that…

Dr. Muniba Faiza

I-TASSER: Uses & Applications

I-TASSER is another most widely used bioinformatics software. It is used for…

Dr. Muniba Faiza

[Tutorial] Trailing of paired end reads using Trimmomatic tool in GALAXY.

Trimmomatic is a read trimming tool for Illumina NGS data . It…

Dr. Muniba Faiza

How to generate config file for docking using Autodock Tools?

A configuration file is one of the required files for docking using…

Dr. Muniba Faiza

How to install Autodock on Ubuntu (Linux) with CUDA GPU support?

Autodock is most widely used for docking. To accelerate the docking process,…

Dr. Muniba Faiza

GROMACS: Uses & Applications

GROMACS stands for GROningen MAchine for Chemical Simulations . It is a…

Dr. Muniba Faiza

[Tutorial] Installing Rosetta 3.21 on Ubuntu

Rosetta is a bioinformatics software for modeling and protein structure analysis .…

Dr. Muniba Faiza