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[Tutorial] Installing Autodock-Vina-develop package on Ubuntu.
Autodock-Vina-develop package offers some extra features in addition to Autodock Vina. It…
I-TASSER: Uses & Applications
I-TASSER is another most widely used bioinformatics software. It is used for…
CoolBox- An open-source toolkit for genomic data visualization
A new toolkit called CoolBox is developed for the visual analysis of…
How to generate config file for docking using Autodock Tools?
A configuration file is one of the required files for docking using…
How to install Autodock on Ubuntu (Linux) with CUDA GPU support?
Autodock is most widely used for docking. To accelerate the docking process,…
Autodock Vina: Uses & Applications
Autodock Vina is one of the most widely used bioinformatics software for…
[Tutorial] Installing Rosetta 3.21 on Ubuntu
Rosetta is a bioinformatics software for modeling and protein structure analysis .…
OVarFlow- A GATK4-based variant calling workflow
An automated workflow for single nucleotide polymorphisms detection is developed. This is…
Generating multiple low-energy conformers using Avogadro
In our previous article, we generated multiple conformers using OpenBabel. In this…
How to generate multiple conformers of a ligand using OpenBabel?
OpenBabel offers several functions including file format conversion, generation of 3D structures…
How to perform virtual screening using Pyrx?
Pyrx is a bioinformatics tool to perform virtual screening . We previously…
SAUTE- New assembler for sequence assembly using target enrichment
A new assembler called SAUTE is developed for sequence assembly that is…
How to perform metal ion-protein docking using idock?
Previously, we provided a tutorial on the installation of idock on Ubuntu…
Installing Raccoon2 plugin on Windows.
We have previously provided an article on the installation of the Raccoon2…
How to analyze HADDOCK results using Pymol script generated from PRODIGY?
In one of our previously published articles, we demonstrated protein-protein docking using…
Installing PatchDock on Ubuntu (Linux)
PatchDock is a docking algorithm that is based on the shape complementarity…
How to perform site-specific docking using Pyrx?
Pyrx is a virtual screening software that allows the docking of multiple…
Easy installation of some alignment software on Ubuntu (Linux) 18.04 & 20.04
There are commonly used alignment programs such as muscle, blast, clustalx, and…
Installing CDK (Chemistry Development Kit) on Ubuntu (Linux)
CDK stands for chemistry development kit . This is an open source…