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A new high-level Python interface for MD simulation using GROMACS

The roots of the molecular simulation application can be traced back to physics where it was applied to simplified hard-sphere systems [1]. This field of molecular simulation study has gained a lot of interest since then and applied to perform simulations to fold small protein at multi-microsecond scale [2-4], predict functional properties of receptors and to capture the intermediate transitions of the complex [5], and to study the movement and behavior of ligand in a binding pocket and also to predict interactions between receptors and ligands [6,7]. Continue reading “A new high-level Python interface for MD simulation using GROMACS” »

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Softwares/Systems Biology

BioMiner & Personalized Medicine: A new perspective

Personalized medicines have become a very important part of the medicine world now a days. They are also known as ‘Individualized Medicines’. Personalized medicines allow a doctor to prescribe more specific and efficient medicines to a particular patient. This concept has created many more opportunities and aspects in the medicine world. Keep Reading

NGS/Sequence Analysis/Softwares

ALFALFA explained

High throughput sequencing has revolutionized the new world of bioinformatics research. Since everyone is aware of the Human Genome project in which the human genome has been sequenced, millions of species have been sequenced so far. Sequencing is a very important aspect of bioinformatics so new faster and better sequencing techniques are needed . New… Keep Reading

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